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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015919010.1_cds_XP_016468298.1_60953
CDS Infomation

[gene=LOC107790852] [db_xref=GeneID:107790852] [protein=serine/threonine-protein kinase STY46-like] [protein_id=XP_016468298.1] [location=join(92101..92399,92812..92926,93392..93465,93613..93729,94062..94116,95340..95450,95983..96033,97917..98089,98201..98308,98885..98958,99087..99262,100919..101014,103947..104027,104113..104166,104287..104421,104909..104992)] [gbkey=CDS]
Sequence

ATGCTTTTAGACGTGAGCACATTGTTTTCGTGGAGAGAAGATTCTAGAAAAGGGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTGAAATGGTGATGGAGGAT
AACGAAAGTTGTGGTAGTAGAGTGGTGGATTCAGCGCCGACGAACAGTCGCCAACACGGT
AAAAAAATGGAGGTTTACAATGAGGTTCTTCGCCGGCTTAAACAATCCAACAACGTTGAG
GCTCAACAGCCTGCCTTTGACGATGAGCTTTGGGCTCACTTCAATCGCCTACCTACTCGG
TACGCGTTAGATGTGAATGTTGAAAGTGCAGAAGATGTACTCACGCATAAGCGGTTACTA
CATCTCGCACATGATCCGGCTAATAGACCTGCCTTTGATGTCCGGCTGGTGCAGGTTCCT
CCAGTTCCTGATGGAAACTCAGCAGATTCTGTTCCGTTTAGCTCTGCAAACAAGGGAATT
AGCCGAAGCGTCCTTCCTCTACCTGCCTTTGGTTCTTCGCCTAATCTCGAAGCACTTGCT
CTTGAAGCTAACAAATCTGAAGTTCAAGATGGGGATGCTACTGTTACTTGTGGAAATTTG
CTACGGCCCATGCATGAAATTACGTTTTCAACTGATGACAAGCCGAAGCTCCTCAGCCAG
TTAACTTCATTACTAGCTGAGCTTGGGCTGAACATTCAGGAAGCACATGTATTTTCCACT
GTTGATGGCTACTCCCTAGATGTTTTCGTTGTTGATGGTTGGCCCTATGAGGAAGTTGAG
CAGCTTCGAATGGCACTGAAAAGGGAAATTCTGATGATTGAGCAATCTTCACCAAGTCAA
AGTCCATCAGAATCTTTTAGAGAGGAGATCAAAACACTGATCAAATGTGAGTTTGATCCC
GTGACAATTCCTTGTGATGGCGTTGATGTCTGGGAAATTGATCATCAACTTCTAAAGTTT
GAAAACAAGATTGCTTCTGGTTCATATGGTGACTTATACAAAGGTACATACTGCAGTCAG
GAAGTGGCTATCAAGATCCTCAAATCTGAGCGCTTGAACACAGAATTGCAAAAGGAGTTT
GCCCAAGAAGTTTATATCATGAGAAAAGTTCGTCACAAAAATGTCGTGCAATTCATAGGG
GCATGTACTAGGCCCCCAAATCTGTGTATAGTGACAGAGTACATGTCTGGAGGAAGTGTA
TATGACTATTTACACAAACAAAAGGGCAGTTTTAAACTTCCTACTTTGCTCAAAGTAGCA
ATTGATGTATCAAAAGGAATGAATTACCTGCATCAGAATAATATCATACACAGGGACTTG
AAGGCTGCCAATCTATTGATGGATGAAAATGAAGTTGTTAAAGTGGCTGATTTTGGTGTT
GCCAGAGTGAAGGCACAGACTGGCGTCATGACGGCGGAGACCGGGACCTATAGATGGATG
GCCCCTGAGGTTATAGAACACAAGCCATATGATCACAAAGCAGATATTTTCAGTTTCGGG
GTTCTGTTATGGGAATTGATGACTGGAAAGCTCCCATATGAGTACTTGACCCCACTACAA
GCTGCCATTGGAGTGGTCCAGAAGGGGTTGCGACCAATTATTCCCAAAAATACTCATCCA
AAACTTGCTGAGTTGCTTGAAAAATGCTGGCAACGAGATCCAACGTCGAGGCCTGATTTC
CCTGAAATAATAGAGATGTTGCAGCAAATAGCAAAAGAGGTTGCAGATGAGGAAGATGAT
CGTCGCAAGGAGAAGTCATCATCTGGAGGATTCTTTTCAGTCCTCAGACGTGGACACCAC
TAA

Peptide Sequence

PEP ID

XP_016468298.1
PEP Infomation

PREDICTED: serine/threonine-protein kinase STY46-like [Nicotiana tabacum]
Sequence

MLLDVSTLFSWREDSRKGRERERERERERERERVEMVMEDNESCGSRVVDSAPTNSRQHG
KKMEVYNEVLRRLKQSNNVEAQQPAFDDELWAHFNRLPTRYALDVNVESAEDVLTHKRLL
HLAHDPANRPAFDVRLVQVPPVPDGNSADSVPFSSANKGISRSVLPLPAFGSSPNLEALA
LEANKSEVQDGDATVTCGNLLRPMHEITFSTDDKPKLLSQLTSLLAELGLNIQEAHVFST
VDGYSLDVFVVDGWPYEEVEQLRMALKREILMIEQSSPSQSPSESFREEIKTLIKCEFDP
VTIPCDGVDVWEIDHQLLKFENKIASGSYGDLYKGTYCSQEVAIKILKSERLNTELQKEF
AQEVYIMRKVRHKNVVQFIGACTRPPNLCIVTEYMSGGSVYDYLHKQKGSFKLPTLLKVA
IDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKAQTGVMTAETGTYRWM
APEVIEHKPYDHKADIFSFGVLLWELMTGKLPYEYLTPLQAAIGVVQKGLRPIIPKNTHP
KLAELLEKCWQRDPTSRPDFPEIIEMLQQIAKEVADEEDDRRKEKSSSGGFFSVLRRGHH

Transcript Sequence

Gene sequence data has not been registered.